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Microbial communities in animals and the environment actively shape human microbiome composition and functionality. Through direct exposure, shared ecosystems, and environmental reservoirs, these …

Gut microbiome studies often rely on controlled gnotobiotic models or ex vivo setups, while plant micro-biome research must contend with open, heterogeneous environments that pose significant …

Microbiome data transformations can significantly influence feature selection but have a limited efect on classification accuracy. Our findings suggest that while classification is robust across diferent …

To gain a predictive understanding of the beneficial interactions between a host plant and its associated root microbiome, the ecology and potential physiology of its core microbiome must be investigated.

We have identified specific microbiome changes at diferent modalities (microbial taxa, their encoded genes, and synthetized metabolites) and at the interface between them (the interactome) that …

Its findings highlight a potentially common and critical role of within-species diversity in animal-microbiome symbioses. Keywords Deep sea, Horizontally transmitted endosymbionts, Within …

An important step towards unravelling causal host– microbiome interactions and identifying microbial func-tions contributing to human and animal health is to isolate and catalogue representative …

For the gut microbiome, a total of 52,405 GH modules were identified, including 12,565 modules in the midgut and 39,840 modules in the hind-gut. In contrast, only 129 GH modules were identified in the …

Feb 8, 2017 · We present MiRKAT-S, a method that facilitates community-level analysis of the association between the microbiota and survival outcomes and therefore provides a new approach to …